pysam-developers/pysam

Tools (written in C using htslib) for manipulating next-generation sequencing data

cython + htslib == fast VCF and BCF processing

C library for high-throughput sequencing data formats

Efficient pythonic random access to fasta subsequences

C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings

Python library to facilitate genome assembly, annotation, and comparative genomics

Official git repository for Biopython (originally converted from CVS)

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

Bioinformatics I/O libraries in Rust