oncologylab/fp-tools

Combined RNA and ATAC Footprint Training of Gene Regulatory Network

ChIP-seq analysis notes from Ming Tang

MACS -- Model-based Analysis of ChIP-Seq

10x Genomics Single Cell Analysis

Tools to process and analyze deep sequencing data.

📊 A universal enrichment tool for interpreting omics data

CellRank: dynamics from multi-view single-cell data

Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

Gene Set Enrichment Analysis in Python