songlab-cal/gpn

Research code accompanying AlphaGenome

gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

Biological sequence analysis for the modern age.

This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.

Biological foundation modeling from molecular to genome scale

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨

Code and data for GeneGPT.

a set of SKILLS.md for doing bioinformatics with agents like claude code