sgkit-dev/sgkit

Cloud-native genomic dataframes and batch computing

PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. This is a comprehensive update to it.

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

An open-source toolkit for large-scale genomic analysis

Reusable genomic evidence for research and analysis tools: exact read evidence, portable datasets, and managed analyzers.

A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/

Official git repository for Biopython (originally converted from CVS)

Research code accompanying AlphaGenome

Python library to facilitate genome assembly, annotation, and comparative genomics