Footer

Your go-to destination for discovering trending open-source projects and uncovering the insights that matter

Legal

  • Terms and conditions
  • Privacy policy

More

  • Pricing
  • Advertise
  • onedump
  • gosnakego
  • Contact us

Social

  • X (Twitter)
  • GitHub
Trendshift owl
What they build speaks louder than words
© 2026 Trendshift, created by Julian Li with ❤️
SignalAdvertise
Trendshift
SignalAdvertise
Sign in
Trendshift owl

Discover trends that matter

DailyWeeklyMonthlyYearly
Live mentionsTopics
RepositoriesDevelopers
InsightsStats
Busbar
Busbar
Bifrost
Bifrost
AxiomCode
AxiomCode

nf-core/methylseq

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark/bwa-meth + MethylDackel or bwa-mem + rastair

Visit GitHub
Nextflow
199
170
41 contributors
MIT License
website
AchievementsView all →
FeaturedAdvertise to 180K+ monthly visitors
Busbar

Control what AI can do before it acts

Bifrost

Enterprise AI Gateway Built For Scale: Route, Govern, and Secure All Your AI Traffic

AxiomCode

Give Al Agents a Deeper Understanding of Your Codebase with a Code Graph

Momentum

How fast nf-core/methylseq is gaining stars, and where it lands on Trendshift and GitHub Trending

Activity and trending

Stars, forks and merged pull requests each day or month, lined up with the repository's rank on Trendshift Trending

Sep 17 – Oct 19, 2026

Stars +1 in 33 days

01
1

Forks +0 in 33 days

01

Merged PRs 2 in 33 days

01
1

Trendshift Trendingwhere the repository ranked each day it made the top 25

Top 25 in Nextflow

1111514
Sep 17Sep 22Sep 27Oct 2Oct 7Oct 12Oct 17
The left and right arrow keys step from day to day; Home and End go to the first and the last

Stars, forks, merged pull requests and Trendshift Trending rank, by day
DayStars gainedForks gainedMerged PRsNextflow
Thu, Sep 17, 2026+0+00#11
Fri, Sep 18, 2026+0+01#11
Sat, Sep 19, 2026+0+00Not trending
Sun, Sep 20, 2026+0+00Not trending
Mon, Sep 21, 2026+0+00Not trending
Tue, Sep 22, 2026+0+00Not trending
Wed, Sep 23, 2026+1+00#5
Thu, Sep 24, 2026+0+00Not trending
Fri, Sep 25, 2026+0+00Not trending
Sat, Sep 26, 2026+0+00Not trending
Sun, Sep 27, 2026+0+00Not trending
Mon, Sep 28, 2026+0+00Not trending
Tue, Sep 29, 2026+0+00Not trending
Wed, Sep 30, 2026+0+00Not trending
Thu, Oct 1, 2026+0+00Not trending
Fri, Oct 2, 2026+0+00Not trending
Sat, Oct 3, 2026+0+00Not trending
Sun, Oct 4, 2026+0+00Not trending
Mon, Oct 5, 2026+0+00Not trending
Tue, Oct 6, 2026+0+00Not trending
Wed, Oct 7, 2026+0+01Not trending
Thu, Oct 8, 2026+0+00Not trending
Fri, Oct 9, 2026+0+00Not trending
Sat, Oct 10, 2026+0+00Not trending
Sun, Oct 11, 2026+0+00Not trending
Mon, Oct 12, 2026+0+00Not trending
Tue, Oct 13, 2026+0+00Not trending
Wed, Oct 14, 2026+0+00Not trending
Thu, Oct 15, 2026+0+00Not trending
Fri, Oct 16, 2026+0+00#14
Sat, Oct 17, 2026+0+00Not trending
Sun, Oct 18, 2026+0+00Not trending
Mon, Oct 19, 2026+0+00Not trending
Total+1+02
  • 1#1 on the list
  • 7Rank that day
  • Not trending

    • Achievements

    Trendshift snapshots GitHub's daily Trending list and runs its own trending list

    Trendshift Trending

    nf-core/methylseq has trended on Trendshift's daily, weekly and monthly list

    Daily

    First achieved on 23rd, Sep 2026 for Nextflow

    #5 Nextflow Repository Of The Day

    Weekly

    First achieved in Week 39, 2026 for Nextflow

    #11 Nextflow Repository Of The Week

    Monthly

    First achieved in August 2026 for Nextflow

    #24 Nextflow Repository Of The Month

    First achieved on 23rd, Sep 2026 for Nextflow

    #5 Nextflow Repository Of The Day

    First achieved in Week 39, 2026 for Nextflow

    #11 Nextflow Repository Of The Week

    First achieved in August 2026 for Nextflow

    #24 Nextflow Repository Of The Month

    You might also like

    Repositories close to nf-core/methylseq
    FeaturedAdvertise to 180K+ monthly visitors
    Busbar

    Control what AI can do before it acts

    AxiomCode

    Give Al Agents a Deeper Understanding of Your Codebase with a Code Graph

    Bifrost

    Enterprise AI Gateway Built For Scale: Route, Govern, and Secure All Your AI Traffic

    dpryan79/MethylDackel

    C

    A (mostly) universal methylation extractor for BS-seq experiments.

    18250

    FelixKrueger/Bismark

    Rust

    A tool to map bisulfite converted sequence reads and determine cytosine methylation states

    467111

    nloyfer/wgbs_tools

    Python

    tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies

    19959

    brentp/bwa-meth

    Python

    fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome

    16158

    adamewing/methylartist

    Python

    Tools for plotting methylation data in various ways

    19920

    nf-core/chipseq

    Nextflow

    ChIP-seq peak-calling, QC and differential analysis pipeline.

    245162

    nf-core/atacseq

    Nextflow

    ATAC-seq peak-calling and QC analysis pipeline

    232139

    maxplanck-ie/snakepipes

    Python

    Customizable workflows based on snakemake and python for the analysis of NGS data

    40490

    deeptools/deepTools

    Python

    Tools to process and analyze deep sequencing data.

    770223