common-workflow-language/common-workflow-language

This is the development home of the workflow management system Snakemake. For general information, see

The open-source AI research workbench for scientific research and agent workflows. Local-first, model-agnostic desktop app with extensible skills, MCP tools and connectors, Python/R execution and traceable artifacts for reproducible research on macOS, Windows and Linux.

A workflow language for data-driven computational pipelines

📓 eLabFTW is the most popular open source electronic lab notebook for research labs.

Quilt is a Scientific Data Management Platform on AWS that helps teams and AI find, trust, and reuse data through deeply versioned, context-rich data packages.

Official git repository for Biopython (originally converted from CVS)

The open-source AI workbench for scientific research

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

Data intensive science for everyone.