NygenAnalytics/CyteTypeR

Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data

Clone of the Bioconductor repository for the SingleR package.

Cell type annotation for single-cell RNA-seq using multi-LLM consensus

Transformer for One-Stop Interpretable Cell-type Annotation

CASSIA: A Multi-Agent LLM-Based Single-Cell Cell Type Annotation Framework

Implementation of hierarchical and correlation mapping algorithms for MapMyCells (https://brain-map.org/bkp/analyze/mapmycells)

A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA sequencing

Metacells - Single-cell RNA Sequencing Analysis

Metacell - Single-cell mRNA Analysis