sacdallago/biotrainer

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

Making Protein Language Modeling Accessible to All Biologists

Python framework for interpretable protein prediction

🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)

Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation

Official implementation of μProtein -- Accelerating protein engineering with fitness landscape modeling and reinforcement learning

Aligning protein generative models with experimental fitness

Accelerate Molecular Biology Research with Machine Learning

Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models and training/task utilities. (ICLR 2024)