nf-core/differentialabundance

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

Repository for edgePython which is a Python implementation of the Bioconductor edgeR package for differential analysis of genomics count data.

Analyze your RNA sequencing data without writing a single line of code

A package for including transposable elements in differential enrichment analysis of sequencing datasets.

📊 A universal enrichment tool for interpreting omics data

Gene Set Enrichment Analysis in Python

Gene set variation analysis

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

Integrated Differential Expression and Pathway analysis