ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more
Like pirovc/ganon, 0 likes 0 Bookmark pirovc/ganon, 0 bookmarks 0 Kun-peng: an ultra-fast, low-memory footprint and accurate taxonomy classifier for all
Like eric9n/Kun-peng, 0 likes 0 Bookmark eric9n/Kun-peng, 0 bookmarks 0 The second version of the Kraken taxonomic sequence classification system
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Like Ecogenomics/GTDBTk, 0 likes 0 Bookmark Ecogenomics/GTDBTk, 0 bookmarks 0 A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
Like shenwei356/taxonkit, 0 likes 0 Bookmark shenwei356/taxonkit, 0 bookmarks 0 Quickly search, compare, and analyze genomic and metagenomic data sets.
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