Footer

Your go-to destination for discovering trending open-source projects and uncovering the insights that matter

Legal

  • Terms and conditions
  • Privacy policy

More

  • Pricing
  • Advertise
  • onedump
  • gosnakego
  • Contact us

Social

  • X (Twitter)
  • GitHub
Trendshift owl
What they build speaks louder than words
© 2026 Trendshift, created by Julian Li with ❤️
SignalAdvertise
Trendshift
SignalAdvertise
Sign in
Trendshift owl

Discover trends that matter

DailyWeeklyMonthlyYearly
Live mentionsTopics
RepositoriesDevelopers
InsightsStats
Busbar
Busbar
Bifrost
Bifrost
AxiomCode
AxiomCode

brainglobe/cellfinder

Automated 3D cell detection in very large images

Visit GitHub
Python
231
81
30 contributors
BSD 3-Clause "New" or "Revised" License
website
FeaturedAdvertise to 180K+ monthly visitors
Busbar

Control what AI can do before it acts

Bifrost

Enterprise AI Gateway Built For Scale: Route, Govern, and Secure All Your AI Traffic

AxiomCode

Give Al Agents a Deeper Understanding of Your Codebase with a Code Graph

Momentum

How fast brainglobe/cellfinder is gaining stars, and where it lands on Trendshift and GitHub Trending

Activity and trending

Stars, forks and merged pull requests each day or month, lined up with the repository's rank on Trendshift Trending

Aug 22 – Oct 19, 2026

Stars +0 in 59 days

01

Forks +2 in 59 days

01
1

Merged PRs 6 in 59 days

01
1

Trendshift Trendingwhere the repository ranked each day it made the top 25

Not in the Trendshift top 25 in this period

Aug 22Aug 30Sep 7Sep 15Sep 23Oct 1Oct 9Oct 17
The left and right arrow keys step from day to day; Home and End go to the first and the last

Stars, forks, merged pull requests and Trendshift Trending rank, by day
DayStars gainedForks gainedMerged PRs
Sat, Aug 22, 2026+0+01
Sun, Aug 23, 2026+0+00
Mon, Aug 24, 2026+0+00
Tue, Aug 25, 2026+0+00
Wed, Aug 26, 2026+0+00
Thu, Aug 27, 2026+0+00
Fri, Aug 28, 2026+0+00
Sat, Aug 29, 2026+0+00
Sun, Aug 30, 2026+0+00
Mon, Aug 31, 2026+0+00
Tue, Sep 1, 2026+0+00
Wed, Sep 2, 2026+0+10
Thu, Sep 3, 2026+0+00
Fri, Sep 4, 2026+0+00
Sat, Sep 5, 2026+0+00
Sun, Sep 6, 2026+0+00
Mon, Sep 7, 2026+0+00
Tue, Sep 8, 2026+0+00
Wed, Sep 9, 2026+0+00
Thu, Sep 10, 2026+0+01
Fri, Sep 11, 2026+0+01
Sat, Sep 12, 2026+0+00
Sun, Sep 13, 2026+0+00
Mon, Sep 14, 2026+0+00
Tue, Sep 15, 2026+0+00
Wed, Sep 16, 2026+0+00
Thu, Sep 17, 2026+0+00
Fri, Sep 18, 2026+0+00
Sat, Sep 19, 2026+0+00
Sun, Sep 20, 2026+0+00
Mon, Sep 21, 2026+0+00
Tue, Sep 22, 2026+0+00
Wed, Sep 23, 2026+0+00
Thu, Sep 24, 2026+0+00
Fri, Sep 25, 2026+0+00
Sat, Sep 26, 2026+0+00
Sun, Sep 27, 2026+0+00
Mon, Sep 28, 2026+0+01
Tue, Sep 29, 2026+0+10
Wed, Sep 30, 2026+0+00
Thu, Oct 1, 2026+0+00
Fri, Oct 2, 2026+0+00
Sat, Oct 3, 2026+0+00
Sun, Oct 4, 2026+0+00
Mon, Oct 5, 2026+0+00
Tue, Oct 6, 2026+0+01
Wed, Oct 7, 2026+0+00
Thu, Oct 8, 2026+0+00
Fri, Oct 9, 2026+0+00
Sat, Oct 10, 2026+0+00
Sun, Oct 11, 2026+0+00
Mon, Oct 12, 2026+0+00
Tue, Oct 13, 2026+0+00
Wed, Oct 14, 2026+0+00
Thu, Oct 15, 2026+0+00
Fri, Oct 16, 2026+0+01
Sat, Oct 17, 2026+0+00
Sun, Oct 18, 2026+0+00
Mon, Oct 19, 2026+0+00
Total+0+26
  • 1#1 on the list
  • 7Rank that day
  • Not trending

Social mentions

Recent discussions about this repository across the web
  1. Jun 41 post

    • First GSoC PR merged today. GGs

      Read full on X, posted by @aymuosk

      @aymuosk · x.com

You might also like

Repositories close to brainglobe/cellfinder
FeaturedAdvertise to 180K+ monthly visitors
Busbar

Control what AI can do before it acts

Bifrost

Enterprise AI Gateway Built For Scale: Route, Govern, and Secure All Your AI Traffic

AxiomCode

Give Al Agents a Deeper Understanding of Your Codebase with a Code Graph

scalableminds/webknossos

TypeScript

Visualize, share and annotate your large 3D images online

18542

google/ffn

Python

Flood-Filling Networks for instance segmentation in 3d volumes.

362108

seung-lab/connected-components-3d

C++

Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

46550

computational-cell-analytics/micro-sam

Jupyter Notebook

Segment Anything for Microscopy

739113

instanseg/instanseg

Python

InstanSeg is a pytorch-based cell and nucleus segmentation pipeline for fluorescence and brightfield microscopy images.

24838

ilastik/ilastik

Python

ilastik-shell, applets, and workflows to string them together.

411192

PytorchConnectomics/pytorch_connectomics

Python

PyTorch Connectomics: segmentation toolbox for EM connectomics

20289

CellProfiler/CellProfiler

Python

An open-source application for biological image analysis

1.1k417

seung-lab/kimimaro

C++

Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

22130