davidaknowles/leafcutter

rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis

A toolset for profiling alternative splicing events in RNA-Seq data.

RNA-seq aligner

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)

A rust implementation of STAR

🤖 Open‑source deep-learning-based splice‑site predictor that decodes splicing patterns across species

Full-Length Alternative Isoform analysis of RNA