GenomiqueENS/eoulsan

Analysis pipelines for genomic sequencing data

Analyze your RNA sequencing data without writing a single line of code

Differential Expression and Gene Ontology enrichment analysis for bulk RNA-seq data

Scaling Single Cell Analysis to Millions of Cells

An open-source toolkit for large-scale genomic analysis

Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection

Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data

A proof of concept of RNAseq pipeline

Customizable workflows based on snakemake and python for the analysis of NGS data