nf-core/circrna

A small-RNA sequencing analysis pipeline

rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis

RNA-seq analysis pipeline for detection of gene-fusions

Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs

Analyze your RNA sequencing data without writing a single line of code

A proof of concept of RNAseq pipeline

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).

A continually expanding collection of RNA-seq tools